Data Book of Transmembrane Protein
[ Japanese version | GPCR (Japanese) ]


2at9

1ap9  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    X-Ray Structure Of Bacteriorhodopsin From Microcrystals Grown In Lipidic Cubic Phases.

1ar1 (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Complex (Oxidoreductase/Antibody)]
    Structure At 2.7 Angstrom Resolution Of The Paracoccus Denitrificans Two-Subunit Cytochrome C Oxidase Complexed With An Antibody Fv Fragment.

1at9  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    Structure Of Bacteriorhodopsin At 3.0 Angstrom Determined By Electron Crystallography.

2at9  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    Structure Of Bacteriorhodopsin At 3.0 Angstrom By Electron Crystallography.

1bm1  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    Crystal Structure Of Bacteriorhodopsin In The Light-Adapted State.

1brd  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.

2brd  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    Crystal Structure Of Bacteriorhodopsin In Purple Membrane.

1brr (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    X-Ray Structure Of The Bacteriorhodopsin Trimer/Lipid Complex.

1brx  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Pump]
    Bacteriorhodopsin/Lipid Complex.

1c3w  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]
    Bacteriorhodopsin/Lipid Complex At 1.55 A Resolution.

1c8r  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]
    Bacteriorhodopsin D96M Br State At 2.0 A Resolution.

1c8s  <PDB>  h1 h2 h3 h4 h5 h6 h_all [Ion Transport]
    Bacteriorhodopsin D96N Late M State Intermediate.

1cwq (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]
    M Intermediate Structure Of The Wild Type Bacteriorhodopsin In Combination With The Ground State Structure.

1dze*  <PDBh1 h2 h3 h4 h5 h6 h7 h_all [Bacteriorhodopsin]
    Structure Of The M Intermediate Of Bacteriorhodopsin Trapped At 100K.

1e0p (Chain A)*  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    L Intermediate Of Bacteriorhodopsin.

1e12  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Ion Pump]
    Halorhodopsin, A Light-Driven Chloride Pump.

1ehk (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h13 h_all [Oxidoreductase]
    Crystal Structure Of The Aberrant Ba3-Cytochrome-C Oxidase From Thermus Thermophilus.

1eul  <PDBh1 h2 h3 h4 h5 h6 h7 h8 h9 h_all [Hydrolase | Calcium Pump]
    Crystal Structure Of Calcium ATPase With Two Bound Calcium Ions.

1f4z  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport, Membrane Protein]
    Bacteriorhodopsin-M Photointermediate State Of The E204Q Mutant At 1.8 Angstrom Resolution.

1f50  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport, Membrane Protein]
    Bacteriorhodopsin-Br State Of The E204Q Mutant At 1.7 Angstrom Resolution.

1f88 (Chain A) <PDBh1 h2 h3 h4 h5 h6 h7 h_all | t1 t2 t3 t4 t5 t6 t7 t_all [Signaling Protein]
    Crystal Structure Of Bovine Rhodopsin.

1fbb  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    Crystal Structure Of Native Conformation Of Bacteriorhodopsin.

1fbk  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    Crystal Structure Of Cytoplasmically Open Conformation Of Bacteriorhodopsin.

1fft (Chain A) <PDB>  h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h13 (h14-15Ȃ)  h_all (h2-13)  [Oxidoreductase]
    The Structure Of Ubiquinol Oxidase From Escherichia Coli.

1fqy  <PDBh1 h2 h3 h4 h5 h_all [Membrane Protein | Aquaporin]
    Structure Of Aquaporin-1 At 3.8 A Resolution By Electron Crystallography.

1fx8  <PDB>  h1 h2 h3 h4 h5 h6 h_all [Membrane Protein]
    Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) With Substrate Glycerol.

1gu8  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    Sensory Rhodopsin U.

1gue  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    Sensory Rhodopsin U.

1h2s (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Menbrane Protein Complex]
    Molecular Basis Of Transmenbrane Signalling By Sensory Rhodopsin U-Transducer Complex.

1h68  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    Sensory Rhodopsin U.

1h6i  <PDB>  h1 h2 h3 h4 h5 h_all [Membrane Protein]
    A Refined Structure Of Human Aquaporin 1.

1hzx (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Signaling Protein]
    Crystal Structure Of Bovine Rhodopsin.

1ih5  <PDB>  h1 h2 h3 h4 h5 h_all [Membrane Protein]
    Crystal Structure Of Aquaporin-1.

1iw6  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    Crystal Structure Of The Ground State Of Bacteriorhodopsin.

1iwo (Chain A) <PDB, eProtSh1 h2 h3 h4 h5 h6 h7 h8 h9 h_all  [Hydrolase | Calcium Adenosinetriphosphatase]
    Crystal Structure Of The Sr Ca2+-ATPase In The Absence Of Ca2+.

1ixf  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    Crystal Structure Of The K Intermediate Of Bacteriorhodopsin.

1j4n*  <PDBh1 h2 h3 h4 h5 h_all | t1 t2 t3 t4 t5 t6 t_all [Membrane Protein | Aquaporin]
    Crystal Structure Of The Aqp1 Water Channel.

1jb0 (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photosynthesis]
    Crystal Structure Of Photosystem I: A Photosynthetic Reaction Center and Core Antenna System From Cyanobacteria.

1jfp  <PDBh1 h2 h3 h4 h5 h6 h7 h_all [Signaling Protein, Membrane Protein]
    Structure Of Bovine Rhodopsin (Dark Adapted).

1jgj*  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Signaling Protein]
    Crystal Structure Of Sensory Rhodopsin U At 2.4 Angstroms: Insights Into Color Tuning and Transducer Interaction.

1jv6  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]
    Bacteriorhodopsin D85S/F219L Double Mutant At 2.00 Angstrom Resolution.

1jv7  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]
    Bacteriorhodopsin O-Like Intermediate State Of The D85S Mutant At 2.25 Angstrom Resolution.

1kg8  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    X-Ray Structure Of An Early-M Intermediate Of Bacteriorhodopsin.

1kg9  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    Structure Of A "Mock-Trapped" Early-M Intermediate Of Bacteriorhosopsin.

1kgb  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Lyase (Aldehyde) Proton Transport]
    Structure Of Ground-State Bacteriorhodopsin.

1kju  <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h_all [Hydrolase]
    Ca2+-ATPase In The E2 State.

1kme (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Membrane Protein]
    Crystal Structure Of Bacteriorhodopsin Crystallized From Bicelles.

1kpk (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h_all [Membrane Protein]
    Crystal Structure Of The Clc Chloride Channel From E. Coli.

1kpl (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h_all [Membrane Protein]
    Crystal Structure Of The Clc Chloride Channel From S. Typhimurium.

1l0m  <PDB>  h1 h2 h3 h4 h5 h6 h_all [Proton Transport]
    Solution Structure Of Bacteriorhodopsin.

1l7v (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h_all [Transport Protein/Hydrolase]
    Bacterial Abc Transporter Involved In B12 Uptake.

1l9h (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Signaling Protein]
    Crystal Structure Of Bovine Rhodopsin At 2.6 Angstroms Resolution.

1lda  <PDB>  h1 h2 h3 h4 h5 h6 h_all [Transport Protein]
    Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) Without Substrate Glycerol.

1ldf  <PDB>  h1 h2 h3 h4 h5 h6 h_all [Transport Protein]
    Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) Mutation W48F, F200T.

1ldi  <PDB>  h1 h2 h3 h4 h5 h6 h_all [Transport Protein]
    Crystal Structure Of The E. Coli Glycerol Facilitator (Glpf) Without Substrate Glycerol.

1ln6  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Membrane Protein]
    Structure Of Bovine Rhodopsin (Metarhodopsin U).

1m0k  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]
    Bacteriorhodopsin K Intermediate At 1.43 A Resolution.

1m0l  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]
    Bacteriorhodopsin/Lipid Complex At 1.47 A Resolution.

1m0m  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Ion Transport]
    Bacteriorhodopsin M1 Intermediate At 1.43 A Resolution.

1m56 (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase]
    Structure Of Cytochrome C Oxidase From Rhodobactor Sphaeroides (Wild Type).

1m57 (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase]
    Structure Of Cytochrome C Oxidase From Rhodobacter Sphaeroides (Eq(I-286) Mutant)).

1mgy  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    Structure Of The D85S Mutant Of Bacteriorhodopsin With Bromide Bound.

1o0a  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    Bacteriorhodopsin L Intermediate At 1.62 A Resolution.

1occ (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase (Cytochrome(C)-Oxygen)]
    Structure Of Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State.

2occ (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase]
    Bovine Heart Cytochrome C Oxidase At The Fully Oxidized State.

1oco (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase]
    Bovine Heart Cytochrome C Oxidase In Carbon Monoxide-Bound State.

1ocr (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase]
    Bovine Heart Cytochrome C Oxidase In The Fully Reduced State.

1ocz (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Oxidoreductase]
    Bovine Heart Cytochrome C Oxidase In Azide-Bound State.

1ots (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h_all [Membrane Protein]
    Structure Of The Escherichia Coli Clc Chloride Channel and Fab Complex.

1ott (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h_all [Membrane Protein]
    Structure Of The Escherichia Coli Clc Chloride Channel E148A Mutant and Fab Complex.

1otu (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h_all [Membrane Protein]
    Structure Of The Escherichia Coli Clc Chloride Channel E148Q Mutant and Fab Complex.

1oy8  <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h_all [Membrane Protein]
    Structural Basis Of Multiple Drug Binding Capacity Of The Acrb Multidrug Efflux Pump.

1oy9  <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h_all [Membrane Protein]
    Structural Basis Of Multiple Drug Binding Capacity Of The Acrb Multidrug Efflux Pump.

1oyd  <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h_all [Membrane Protein]
    Structural Basis Of Multiple Binding Capacity Of The Acrb Multidrug Efflux Pump.

1oye  <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h_all [Membrane Protein]
    Structural Basis Of Multiple Binding Capacity Of The Acrb Multidrug Efflux Pump.

1p8h  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    Bacteriorhodopsin M1 Intermediate Produced At Room Temperature.

1p8i  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    F219L Bacteriorhodopsin Mutant.

1p8u  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    Bacteriorhodopsin N' Intermediate At 1.62 A Resolution.

1pf4 (Chain A, B) <PDB>  h1 h2 h3 h4 h5 h6 h_all [Lipid Transport]
    Structure Of Msba From Vibrio Cholera: A Multidrug Resistance Abc Transporter Homolog In A Closed Conformation.

1qhj  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    X-Ray Structure Of Bacteriorhodopsin Grown In Lipidic Cubic Phases.

1qko  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    High Resolution X-Ray Structure Of An Early Intermediate In The Bacteriorhodopsin Photocycle.

1qkp  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    High Resolution X-Ray Structure Of An Early Intermediate In The Bacteriorhodopsin Photocycle.

1qle (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h8 h9 h10 h11 h12 h_all [Complex (Oxidoreductase/Antibody)]
    Cryo-Structure Of The Paracoccus Denitrificans Four-Subunit Cytochrome C Oxidase In The Completely Oxidized State Complexed With An Antibody Fv Fragment.

1qm8  <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Photoreceptor]
    Structure Of Bacteriorhodopsin At 100 K.

1uaz (Chain A) <PDB>  h1 h2 h3 h4 h5 h6 h7 h_all [Proton Transport]
    Crystal Structure Of Archaerhodopsin-1.

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Acidic/Neutral/Basic  Polar/Hydrophobic  Hydropathy Index  I/O  pI  Conformational Preferences (α-helix, β-strand#
Hydrogen Bonds   S-S Bonds  
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  • 'Amino' colors
      ASP  GLU  CYS  MET  LYS  ARG  SER  THR  PHE  TYR  ASN  GLN  GLY  LEU  VAL  ILE  ALA  TRP  HIS  PRO

    -- See Amino Acid Properties --
  • Acidic, Neutral [Aromatic], Basic
      ASP  GLU  GLY  ALA  VAL  LEU  ILE  CYS  SER  THR  ASN  GLN  PRO  MET  PHE  TYR  TRP  LYS  ARG  HIS
  • Polar [Acidic, Basic], Nonpolar (Hydrophobic) 
      SER  THR  TYR  CYS  ASN  GLN  ASP  GLU  LYS  ARG  HIS  GLY  ALA  VAL  LEU  ILE  PHE  PRO  MET  TRP
  • Hydropathy Index
      ARG  LYS  ASN  ASP  GLN  GLU  HIS  PRO  TYR  TRP  SER  THR  GLY  ALA  MET  CYS  PHE  LEU  VAL  ILE
  • I/O
      ASN  SER  ASP  GLN  GLU  THR  ARG  HIS  GLY  LYS  TYR  TRP  CYS  MET  PRO  PHE  ALA  VAL  LEU  ILE
  • pI
      ASP  GLU  CYS  ASN  PHE  GLN  TYR  SER  MET  TRP  VAL  GLY  LEU  ALA  ILE  THR  PRO  HIS  LYS  ARG



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